SRX063912
GSM726977: SKNO-1 CBFb (A1329 Diagenode) no

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBFB

Cell type

Cell type Class
Blood
Cell type
SKNO-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
SKNO-1 (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
no
antibody
CBFb
antibody vendor
Diagenode
antibody catalog number
A1329

Sequenced DNA Library

library_name
GSM726977: SKNO-1_CBFb (A1329_Diagenode)_no
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28162540
Reads aligned (%)
62.2
Duplicates removed (%)
74.7
Number of peaks
8267 (qval < 1E-05)

hg19

Number of total reads
28162540
Reads aligned (%)
61.7
Duplicates removed (%)
75.7
Number of peaks
8138 (qval < 1E-05)

Base call quality data from DBCLS SRA